Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908584.1_cds_XP_016458727.1_52323
CDS Infomation

[gene=LOC107782364] [db_xref=GeneID:107782364] [protein=protein SSUH2 homolog isoform X2] [protein_id=XP_016458727.1] [location=complement(join(32316..32700,33132..33257,33517..33658,33854..34185,34577..34643,35876..36088,38129..38150))] [gbkey=CDS]
Sequence

ATGGAGGAGCCACTGTTGACAGCAAGGGAAACAGGTCAAAGAGGGAGTGAGAGATGGAGT
TCTTATGAGAATGTGGGAAGGGCGGGCTCTGTGATCCCTACGACATCCTTGGCCGGATCA
GAAGTCAGTGTCGATGAGATTCGGTCTGCTGCTTCTATGTCAGTGCCTTACTCTCCTTAT
CTCCATGCCCCCTTGATTAGCTCTCCCCAATCCCAATCTCAGCCACAATCTTACGAGCAA
GGGATTGTTTATCAAGGTGGGTACTATGGAGCTGCAGGTGAAGCCGCTGGTGATCTAAGG
AGGCAAGTGCTAGACGATGTAGAAGTACGAGAGTTGCTTATAGATCATGTTGGCCATCGC
TGCTGTTGGGGAAGTCGTCCAGCTCGGACCTGGAAGATTCATGCAATTGAAGATTGCAAT
GTCTATGTGGGAACGCTAGAAACTTTCACGGAAGAGAGAGATACAATTATAGAGAAGGAG
CCATACTCCACTGGCAGCATTGACGGAAAGGACAAGGGGCCTGAAATGGGAATATGGGAG
TTGGATTTAAGGTCTGAATTTCCTGTATTGTTTGTGCCTTACAAGGAGTCACGACTGAGA
ATTCCTCATTCGGAAACTATAGAGAAATGTTCAGGTTGTGATGGTCGTGGAAATATAGTT
TGTCCTACTTGCAATGCAGATCAAGATCCAGGGTTTTACAAGGAGGGTCAAATGGCCCAG
TGTCTGACTTGCTACGGAAGGGGTCTAATTGCTCACAAGGACGGATCTGACACAATATGC
CTGAAGTGTAAAGGTAATGGGAAAATTCCTTGTGCGACATGTGAATCTCGTGGCCTGATC
AAATGCCAAACATGCCAAGGTGGTGGCTCTCTTTTGGCATGGAAAGTAGCTGTTGTTAGA
TGGAGGACACTTTCAACCCGGAAAGTAAACGCTACAAGTGGAGCAGGTTCTGTTCCAGAT
GACGTGTTTCACCGAGCGAAGGGAGTTCAGTTGTGCAATAACCAAGCTTACCAGTGCACT
CCAGCCTACTTTGCTGATTCATATTTTCTTAACAAGTTCTCTTCTGAAGTAATTGCAGAG
AGGCCTTCTATACCTACTACTGCAAGGATCATATGCGAGCGACACACCATCTCTGTTGTC
CCGGTGACTCGCGTGACCATGACTGATCGTAATCGCTCCTTCAGTTTCTATATCATTGGA
AATGGAAGAGAGGTTTATATGAAAGACTACTATCCTTCTAGGTTTTGTTGGGGCCTTTGT
CCTTGCTTGGAATGGTTGAAACTATAA

Peptide Sequence

PEP ID

XP_016458727.1
PEP Infomation

PREDICTED: protein SSUH2 homolog isoform X2 [Nicotiana tabacum]
Sequence

MEEPLLTARETGQRGSERWSSYENVGRAGSVIPTTSLAGSEVSVDEIRSAASMSVPYSPY
LHAPLISSPQSQSQPQSYEQGIVYQGGYYGAAGEAAGDLRRQVLDDVEVRELLIDHVGHR
CCWGSRPARTWKIHAIEDCNVYVGTLETFTEERDTIIEKEPYSTGSIDGKDKGPEMGIWE
LDLRSEFPVLFVPYKESRLRIPHSETIEKCSGCDGRGNIVCPTCNADQDPGFYKEGQMAQ
CLTCYGRGLIAHKDGSDTICLKCKGNGKIPCATCESRGLIKCQTCQGGGSLLAWKVAVVR
WRTLSTRKVNATSGAGSVPDDVFHRAKGVQLCNNQAYQCTPAYFADSYFLNKFSSEVIAE
RPSIPTTARIICERHTISVVPVTRVTMTDRNRSFSFYIIGNGREVYMKDYYPSRFCWGLC
PCLEWLKL

Transcript Sequence

Gene sequence data has not been registered.